Pretty sure I turned mine in and out like my other Nissans...I'll give them a check though to make sure I'm not remembering incorrectly.
Anyway, just installed the new window seal for the driver side yesterday. I'm down to minimizing the really small noises now, but it's quieter this afternoon than last night after sitting in the sun at work and stretching into place over the window. Mine wasn't terrible to begin with but the combination of the three seals plus windshield sealant is working out pretty well.
Next step, dropping the roof liner and damping the roof, the last swath of undamped thin gauge metal in the truck...